BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G01SP1|AL425746
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1256 1528 0.0
>3x_Contig1256
Length = 6519
Score = 1528 bits (770), Expect = 0.0
Identities = 784/788 (99%), Gaps = 1/788 (0%)
Strand = Plus / Plus
Query: 1 gcaaagaaaacttttwctgtctttctccccacctccttgggtcgttctttggtacatggt 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2368 gcaaagaaaactgcttctgtctttctccccacctccttgggtcgttctttggtacatggt 2427
Query: 61 tttgaaaagatagggcttgaagaatccttttcgaaaccatttttaagaagagatcttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2428 tttgaaaagatagggcttgaagaatccttttcgaaaccatttttaagaagagatcttgaa 2487
Query: 121 aaggatctacagctaatctgtggaggtacaaaggataagaaagacgttgtatcattaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 aaggatctacagctaatctgtggaggtacaaaggataagaaagacgttgtatcattaatc 2547
Query: 181 atcggcatgtatagaaattattatcagatcacgaccagtcaaatgaggaatttgattaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 atcggcatgtatagaaattattatcagatcacgaccagtcaaatgaggaatttgattaag 2607
Query: 241 gtttacaacgatattaaagcagaaagccaaggccaagttactcagcgaaacagagtaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 gtttacaacgatattaaagcagaaagccaaggccaagttactcagcgaaacagagtaaat 2667
Query: 301 tagtgtatggttaatatggaagataacagtttagatgatgctaattctatctaattaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2668 tagtgtatggttaatatggaagataacagtttagatgatgctaattctatctaattaatt 2727
Query: 361 ctacattatatataagtatcatagttttgtttgcatgaattgtttttcttttcatgaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2728 ctacattatatataagtatcatagttttgtttgcatgaattgtttttcttttcatgaatg 2787
Query: 421 ctgcgtta-cttgtcgaggatgtactattttatatttatttcaataaggaacggttcata 479
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2788 ctgcgttagcttgtcgaggatgtactattttatatttatttcaataaggaacggttcata 2847
Query: 480 ttataattgcctggtctttcatggatgtggccctacaccagcaagcagaactttgggctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2848 ttataattgcctggtctttcatggatgtggccctacaccagcaagcagaactttgggctt 2907
Query: 540 caacctggatccacactttgatatttgctctctcaaatattctttcgacacgctttttta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2908 caacctggatccacactttgatatttgctctctcaaatattctttcgacacgctttttta 2967
Query: 600 tgatggttgaattttctccatctatgtattggacatggatataaccaacgagcgatggct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2968 tgatggttgaattttctccatctatgtattggacatggatataaccaacgagcgatggct 3027
Query: 660 ttgcagaggaattactctttgacttggcttccactggagactctgtatgtgaatgtgaac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3028 ttgcagaggaattactctttgacttggcttccactggagactctgtatgtgaatgtgaac 3087
Query: 720 tttcatgagagtgattgttctcctcttcatgagagttcgatgatgtgtgagagtgaccat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3088 tttcatgagagtgattgttctcctcttcatgagagttcgatgatgtgtgagagtgaccat 3147
Query: 780 gagaatgg 787
||||||||
Sbjct: 3148 gagaatgg 3155
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6629
Number of Sequences: 1807
Number of extensions: 6629
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)